Overall metadata from analysis of 5 healthy blood donors and 5 healthy tonsil tissue donors.

overall_metadata

Format

A data.frame with 23734 cells (rows) and 8 variables:

orig.ident

name assigned by default to the Seurat object

nCount_RNA

number of RNA molecules counted per cell (1038--74386)

nFeature_RNA

number of RNA molecules counted per cell (41--6582)

sample_id

individual donor samples, HD_PBMC 1 to 5 and HD_Tonsil 1 to 5

sample_type

tissue of origin, either PBMC or Tonsil

RNA_snn_res.0.3

Louvian clustering results, clusters 0 to 13

seurat_clusters

clusters assigned by default, same as RNA_snn_res.0.3

cell_types

cell types identified by canonical gene expression (B cells, CD14-CD16+ monocytes, CD14+CD16- monocytes, CD1C+ DCs, CD4 T cells, CD8 T cells, NK cells, pDCs, Plasmablasts, RBCs)

Source

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE139324/