UMAP embedding and cell types from HCA BM 40k dataset

This is the UMAP embedding and the canonical immune lineages from the Human Cell Atlast BM 40k dataset, which is available through the SeuratData package. This is useful as a small dataset to demonstrate a use case for celltalker.

hca_bm_umap_cell_types

Format

A data.frame with 33839 rows and 3 variables:

UMAP_1

first dimension of the UMAP

UMAP_2

second dimension of the UMAP

cell_types

annotated cell types from the HCA BM 40K dataset

Source

https://github.com/satijalab/seurat-data