circos_plot.Rd
Creates a circos plot from the list of ligands and receptors
circos_plot( ligand_receptor_frame, cell_group_colors, ligand_color = "blue", receptor_color = "red", cex_outer = 0.5, cex_inner = 0.4 )
ligand_receptor_frame | Resulting tibble (usually filtered in some way) from the celltalk function. |
---|---|
cell_group_colors | Colors used for the groups of cells in the outer track of the circos plot. |
ligand_color | Color to use for ligands. Defaults to "blue". |
receptor_color | Color to use for the receptors. Defaults to "red". |
cex_outer | Size of the text for the cell groups in the outer layer of the circos plot. Default is 0.5. |
cex_inner | Size of the text for the ligand and receptors in the inner layer of the circos plot. Default is 0.4. |
Generates a circos plot connecting ligands and receptors across cell types for a given sample group